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Beta Human CLASH/CLIP miRNA-target workflow

✓ Standard Analysis
Includes gene-level quantification (TPM/Counts) using full annotation.
(Gaidatzis et al., 2015). Compares exonic vs. intronic changes to distinguish transcriptional from post-transcriptional regulation.
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✓ Standard Analysis
Groups targets into Conserved vs. All.
Focuses on Top 25% high-efficacy targets (mRNA 3' UTR only). Ref: Agarwal et al. (2015).
Overview of Analysis Tools